Publications – Page 26 – Instituto de Biología Celular y Molecular de Plantas (IBMCP)

Temporal dynamics of intrahost molecular evolution for a plant RNA virus

Cuevas JM, Willemsen A, Hillung J, Zwart MP, Elena SF.

Mol Biol Evol. 2015 May;32(5):1132-47. doi: 10.1093/molbev/msv028. Epub 2015 Feb 6.

2015

Silencing C19-GA 2-oxidases induces parthenocarpic development and inhibits lateral branching in tomato plants

Martínez-Bello L, Moritz T, López-Díaz I.

J Exp Bot. 2015 Sep;66(19):5897-910. doi: 10.1093/jxb/erv300. Epub 2015 Jun 19.

2015

Mutation at the tomato excessive number of floral organs (ENO) locus impairs floral meristem development, thus promoting an increased number of floral organs and fruit size

Fernández-Lozano A, Yuste-Lisbona FJ, Pérez-Martín F, Pineda B, Moreno V, Lozano R, Angosto T.

Plant Sci. 2015 Mar;232:41-8. doi: 10.1016/j.plantsci.2014.12.007. Epub 2014 Dec 15.

2015

A fungal transcription factor gene is expressed in plants from its own promoter and improves drought tolerance

Martínez F, Arif A, Nebauer SG, Bueso E, Ali R, Montesinos C, Brunaud V, Muñoz-Bertomeu J, Serrano R.

Planta. 2015 Jul;242(1):39-52. doi: 10.1007/s00425-015-2285-5. Epub 2015 Mar 26.

2015

Software-assisted stacking of gene modules using GoldenBraid 2.0 DNA-assembly framework

Vazquez-Vilar M, Sarrion-Perdigones A, Ziarsolo P, Blanca J, Granell A, Orzaez D.

Methods Mol Biol. 2015;1284:399-420. doi: 10.1007/978-1-4939-2444-8_20.

2015

Coordinated gene regulation in the initial phase of salt stress adaptation

Vanacloig-Pedros E, Bets-Plasencia C, Pascual-Ahuir A, Proft M.

J Biol Chem. 2015 Apr 17;290(16):10163-75. doi: 10.1074/jbc.M115.637264. Epub 2015 Mar 5.

2015

Leaf expansion in Arabidopsis is controlled by a TCP-NGA regulatory module likely conserved in distantly related species

Ballester P, Navarrete-Gómez M, Carbonero P, Oñate-Sánchez L, Ferrándiz C.

Physiol Plant. 2015 Sep;155(1):21-32. doi: 10.1111/ppl.12327. Epub 2015 Feb 28.

2015

Viroid RNA turnover: characterization of the subgenomic RNAs of potato spindle tuber viroid accumulating in infected tissues provides insights into decay pathways operating in vivo

Minoia S, Navarro B, Delgado S, Di Serio F, Flores R.

Nucleic Acids Res. 2015 Feb 27;43(4):2313-25. doi: 10.1093/nar/gkv034. Epub 2015 Feb 6.

2015

Functional conservation of an ancestral Pellino protein in helminth species

Cluxton CD, Caffrey BE, Kinsella GK, Moynagh PN, Fares MA, Fallon PG.

Sci Rep. 2015 Jun 29;5:11687. doi: 10.1038/srep11687.

2015

Metabolomic profiling of plant tissues

Rambla JL, López-Gresa MP, Bellés JM, Granell A.

Methods Mol Biol. 2015;1284:221-35. doi: 10.1007/978-1-4939-2444-8_11.

2015

Recent positive selection has acted on genes encoding proteins with more interactions within the whole human interactome

Luisi P, Alvarez-Ponce D, Pybus M, Fares MA, Bertranpetit J, Laayouni H.

Genome Biol Evol. 2015 Apr 2;7(4):1141-54. doi: 10.1093/gbe/evv055.

2015

Identification of Salt Stress Biomarkers in Romanian Carpathian Populations of Picea abies (L.) Karst

Schiop ST, Al Hassan M, Sestras AF, Boscaiu M, Sestras RE, Vicente O.

PLoS One. 2015 Aug 19;10(8):e0135419. doi: 10.1371/journal.pone.0135419. eCollection 2015.

2015

Comparative analysis among the small RNA populations of source, sink and conductive tissues in two different plant-virus pathosystems

Herranz MC, Navarro JA, Sommen E, Pallas V.

BMC Genomics. 2015 Feb 22;16(1):117. doi: 10.1186/s12864-015-1327-5.

2015

Comparative proteomic analysis of melon phloem exudates in response to viral infection

Serra-Soriano M, Navarro JA, Genoves A, Pallás V.

J Proteomics. 2015 Jun 21;124:11-24. doi: 10.1016/j.jprot.2015.04.008. Epub 2015 Apr 17.

2015

Novel disease susceptibility factors for fungal necrotrophic pathogens in Arabidopsis

Dobón A, Canet JV, García-Andrade J, Angulo C, Neumetzler L, Persson S, Vera P.

PLoS Pathog. 2015 Apr 1;11(4):e1004800. doi: 10.1371/journal.ppat.1004800. eCollection 2015 Apr.

2015

Evaluating the within-host fitness effects of mutations fixed during virus adaptation to different ecotypes of a new host

Hillung J, Cuevas JM, Elena SF.

Philos Trans R Soc Lond B Biol Sci. 2015 Aug 19;370(1675):20140292. doi: 10.1098/rstb.2014.0292.

2015

The transcriptional regulator BBX24 impairs DELLA activity to promote shade avoidance in Arabidopsis thaliana

Crocco CD, Locascio A, Escudero CM, Alabadí D, Blázquez MA, Botto JF.

Nat Commun. 2015 Feb 6;6:6202. doi: 10.1038/ncomms7202.

2015

The gibberellin precursor GA12 acts as a long-distance growth signal in Arabidopsis

Regnault T, Davière JM, Wild M, Sakvarelidze-Achard L, Heintz D, Carrera Bergua E, Lopez Diaz I, Gong F, Hedden P, Achard P.

Nat Plants. 2015 Jun 1;1:15073. doi: 10.1038/nplants.2015.73.

2015

Wide-genome QTL mapping of fruit quality traits in a tomato RIL population derived from the wild-relative species Solanum pimpinellifolium L

Capel C, Fernández del Carmen A, Alba JM, Lima-Silva V, Hernández-Gras F, Salinas M, Boronat A, Angosto T, Botella MA, Fernández-Muñoz R, Granell A, Capel J, Lozano R.

Theor Appl Genet. 2015 Oct;128(10):2019-35. doi: 10.1007/s00122-015-2563-4. Epub 2015 Jul 12.

2015

Matters of Size: Genetic Bottlenecks in Virus Infection and Their Potential Impact on Evolution

Zwart MP, Elena SF.

Annu Rev Virol. 2015 Nov;2(1):161-79. doi: 10.1146/annurev-virology-100114-055135.

2015

Fitness Trade-Offs Determine the Role of the Molecular Chaperonin GroEL in Buffering Mutations

Sabater-Muñoz B, Prats-Escriche M, Montagud-Martínez R, López-Cerdán A, Toft C, Aguilar-Rodríguez J, Wagner A, Fares MA.

Mol Biol Evol. 2015 Oct;32(10):2681-93. doi: 10.1093/molbev/msv144. Epub 2015 Jun 27.

2015

Distribution of mutational fitness effects and of epistasis in the 5′ untranslated region of a plant RNA virus

Bernet GP, Elena SF.

BMC Evol Biol. 2015 Dec 7;15:274. doi: 10.1186/s12862-015-0555-2.

2015

Different Mechanisms Confer Gradual Control and Memory at Nutrient- and Stress-Regulated Genes in Yeast

Rienzo A, Poveda-Huertes D, Aydin S, Buchler NE, Pascual-Ahuir A, Proft M.

Mol Cell Biol. 2015 Nov;35(21):3669-83. doi: 10.1128/MCB.00729-15. Epub 2015 Aug 17.

2015

Nuclear localization of the dehydrin OpsDHN1 is determined by histidine-rich motif

Hernández-Sánchez IE, Maruri-López I, Ferrando A, Carbonell J, Graether SP, Jiménez-Bremont JF.

Front Plant Sci. 2015 Sep 7;6:702. doi: 10.3389/fpls.2015.00702. eCollection 2015.

2015

Viral Strain-Specific Differential Alterations in Arabidopsis Developmental Patterns

Sánchez F, Manrique P, Mansilla C, Lunello P, Wang X, Rodrigo G, López-González S, Jenner C, González-Melendi P, Elena SF, Walsh J, Ponz F.

Mol Plant Microbe Interact. 2015 Dec;28(12):1304-15. doi: 10.1094/MPMI-05-15-0111-R. Epub 2015 Dec 8.

2015

Plastidial Glycolytic Glyceraldehyde-3-Phosphate Dehydrogenase Is an Important Determinant in the Carbon and Nitrogen Metabolism of Heterotrophic Cells in Arabidopsis

Anoman AD, Muñoz-Bertomeu J, Rosa-Téllez S, Flores-Tornero M, Serrano R, Bueso E, Fernie AR, Segura J, Ros R.

Plant Physiol. 2015 Nov;169(3):1619-37. doi: 10.1104/pp.15.00696. Epub 2015 Jul 1.

2015

Exploring the Dynamics and Mutational Landscape of Riboregulation with a Minimal Synthetic Circuit in Living Cells

Rodrigo G, Majer E, Prakash S, Daròs JA, Jaramillo A, Poyatos JF.

Biophys J. 2015 Sep 1;109(5):1070-6. doi: 10.1016/j.bpj.2015.07.021.

2015

Characterization of maize spermine synthase 1 (ZmSPMS1): Evidence for dimerization and intracellular location

Maruri-López I, Hernández-Sánchez IE, Ferrando A, Carbonell J, Jiménez-Bremont JF.

Plant Physiol Biochem. 2015 Dec;97:264-71. doi: 10.1016/j.plaphy.2015.10.017. Epub 2015 Oct 22.

2015

The tomato res mutant which accumulates JA in roots in non-stressed conditions restores cell structure alterations under salinity

Garcia-Abellan JO, Fernandez-Garcia N, Lopez-Berenguer C, Egea I, Flores FB, Angosto T, Capel J, Lozano R, Pineda B, Moreno V, Olmos E, Bolarin MC.

Physiol Plant. 2015 Nov;155(3):296-314. doi: 10.1111/ppl.12320. Epub 2015 Feb 6.

2015

Inactivation of PYR/PYL/RCAR ABA receptors by tyrosine nitration may enable rapid inhibition of ABA signaling by nitric oxide in plants

Castillo MC, Lozano-Juste J, González-Guzmán M, Rodriguez L, Rodriguez PL, León J.

Sci Signal. 2015 Sep 1;8(392):ra89. doi: 10.1126/scisignal.aaa7981.

2015