Publications – Page 25 – Instituto de Biología Celular y Molecular de Plantas (IBMCP)

Changes in the DNA methylation pattern of the host male gametophyte of viroid-infected cucumber plants

Castellano M, Martinez G, Marques MC, Moreno-Romero J, Köhler C, Pallas V, Gomez G.

J Exp Bot. 2016 Oct;67(19):5857-5868. doi: 10.1093/jxb/erw353. Epub 2016 Oct 3.

2016

Effect of Host Species on Topography of the Fitness Landscape for a Plant RNA Virus

Cervera H, Lalić J, Elena SF.

J Virol. 2016 Oct 28;90(22):10160-10169. doi: 10.1128/JVI.01243-16. Print 2016 Nov 15.

2016

Genetic control of inflorescence architecture in legumes

Benlloch R, Berbel A, Ali L, Gohari G, Millán T, Madueño F.

Front Plant Sci. 2015 Jul 21;6:543. doi: 10.3389/fpls.2015.00543. eCollection 2015.

2015

A mechanism of growth inhibition by abscisic acid in germinating seeds of Arabidopsis thaliana based on inhibition of plasma membrane H+-ATPase and decreased cytosolic pH, K+, and anions

Planes MD, Niñoles R, Rubio L, Bissoli G, Bueso E, García-Sánchez MJ, Alejandro S, Gonzalez-Guzmán M, Hedrich R, Rodriguez PL, Fernández JA, Serrano R.

J Exp Bot. 2015 Feb;66(3):813-25. doi: 10.1093/jxb/eru442. Epub 2014 Nov 4.

2015

Dynamic signal processing by ribozyme-mediated RNA circuits to control gene expression

Shen S, Rodrigo G, Prakash S, Majer E, Landrain TE, Kirov B, Daròs JA, Jaramillo A.

Nucleic Acids Res. 2015 May 26;43(10):5158-70. doi: 10.1093/nar/gkv287. Epub 2015 Apr 27.

2015

Pre-symptomatic transcriptome changes during cold storage of chilling sensitive and resistant peach cultivars to elucidate chilling injury mechanisms

Pons Puig C, Dagar A, Marti Ibanez C, Singh V, Crisosto CH, Friedman H, Lurie S, Granell A.

BMC Genomics. 2015 Mar 26;16(1):245. doi: 10.1186/s12864-015-1395-6.

2015

Genome Wide Binding Site Analysis Reveals Transcriptional Coactivation of Cytokinin-Responsive Genes by DELLA Proteins

Marín-de la Rosa N, Pfeiffer A, Hill K, Locascio A, Bhalerao RP, Miskolczi P, Grønlund AL, Wanchoo-Kohli A, Thomas SG, Bennett MJ, Lohmann JU, Blázquez MA, Alabadí D.

PLoS Genet. 2015 Jul 2;11(7):e1005337. doi: 10.1371/journal.pgen.1005337. eCollection 2015 Jul.

2015

Global-scale computational analysis of genomic sequences reveals the recombination pattern and coevolution dynamics of cereal-infecting geminiviruses

Wu B, Shang X, Schubert J, Habekuß A, Elena SF, Wang X.

Sci Rep. 2015 Jan 30;5:8153. doi: 10.1038/srep08153.

2015

Function of glutathione peroxidases in legume root nodules

Matamoros MA, Saiz A, Peñuelas M, Bustos-Sanmamed P, Mulet JM, Barja MV, Rouhier N, Moore M, James EK, Dietz KJ, Becana M.

J Exp Bot. 2015 May;66(10):2979-90. doi: 10.1093/jxb/erv066. Epub 2015 Mar 4.

2015

Variability of candidate genes, genetic structure and association with sugar accumulation and climacteric behavior in a broad germplasm collection of melon (Cucumis melo L.)

Leida C, Moser C, Esteras C, Sulpice R, Lunn JE, de Langen F, Monforte AJ, Picó B.

BMC Genet. 2015 Mar 19;16:28. doi: 10.1186/s12863-015-0183-2.

2015

A pospiviroid from symptomless portulaca plants closely related to iresine viroid 1

Verhoeven JT, Roenhorst JW, Hooftman M, Meekes ET, Flores R, Serra P.

Virus Res. 2015 Jul 2;205:22-6. doi: 10.1016/j.virusres.2015.05.005. Epub 2015 May 16.

2015

Key importance of small RNA binding for the activity of a glycine-tryptophan (GW) motif-containing viral suppressor of RNA silencing

Pérez-Cañamás M, Hernández C.

J Biol Chem. 2015 Jan 30;290(5):3106-20. doi: 10.1074/jbc.M114.593707. Epub 2014 Dec 10.

2015

Uptake of inorganic phosphate is a limiting factor for Saccharomyces cerevisiae during growth at low temperatures

Vicent I, Navarro A, Mulet JM, Sharma S, Serrano R.

FEMS Yeast Res. 2015 May;15(3):fov008. doi: 10.1093/femsyr/fov008. Epub 2015 Feb 26.

2015

Toxicity, mutagenicity and transport in Saccharomyces cerevisiae of three popular DNA intercalating fluorescent dyes

Sayas E, García-López F, Serrano R.

Yeast. 2015 Sep;32(9):595-606. doi: 10.1002/yea.3081. Epub 2015 Jul 21.

2015

TCP14 and TCP15 mediate the promotion of seed germination by gibberellins in Arabidopsis thaliana

Resentini F, Felipo-Benavent A, Colombo L, Blázquez MA, Alabadí D, Masiero S.

Mol Plant. 2015 Mar;8(3):482-5. doi: 10.1016/j.molp.2014.11.018. Epub 2014 Dec 17.

2015

The origins of mutational robustness

Fares MA.

Trends Genet. 2015 Jul;31(7):373-81. doi: 10.1016/j.tig.2015.04.008. Epub 2015 May 23.

2015

Protein kinase GCN2 mediates responses to glyphosate in Arabidopsis

Faus I, Zabalza A, Santiago J, Nebauer SG, Royuela M, Serrano R, Gadea J.

BMC Plant Biol. 2015 Jan 21;15:14. doi: 10.1186/s12870-014-0378-0.

2015

Temporal dynamics of intrahost molecular evolution for a plant RNA virus

Cuevas JM, Willemsen A, Hillung J, Zwart MP, Elena SF.

Mol Biol Evol. 2015 May;32(5):1132-47. doi: 10.1093/molbev/msv028. Epub 2015 Feb 6.

2015

Silencing C19-GA 2-oxidases induces parthenocarpic development and inhibits lateral branching in tomato plants

Martínez-Bello L, Moritz T, López-Díaz I.

J Exp Bot. 2015 Sep;66(19):5897-910. doi: 10.1093/jxb/erv300. Epub 2015 Jun 19.

2015

Mutation at the tomato excessive number of floral organs (ENO) locus impairs floral meristem development, thus promoting an increased number of floral organs and fruit size

Fernández-Lozano A, Yuste-Lisbona FJ, Pérez-Martín F, Pineda B, Moreno V, Lozano R, Angosto T.

Plant Sci. 2015 Mar;232:41-8. doi: 10.1016/j.plantsci.2014.12.007. Epub 2014 Dec 15.

2015

A fungal transcription factor gene is expressed in plants from its own promoter and improves drought tolerance

Martínez F, Arif A, Nebauer SG, Bueso E, Ali R, Montesinos C, Brunaud V, Muñoz-Bertomeu J, Serrano R.

Planta. 2015 Jul;242(1):39-52. doi: 10.1007/s00425-015-2285-5. Epub 2015 Mar 26.

2015

Software-assisted stacking of gene modules using GoldenBraid 2.0 DNA-assembly framework

Vazquez-Vilar M, Sarrion-Perdigones A, Ziarsolo P, Blanca J, Granell A, Orzaez D.

Methods Mol Biol. 2015;1284:399-420. doi: 10.1007/978-1-4939-2444-8_20.

2015

Coordinated gene regulation in the initial phase of salt stress adaptation

Vanacloig-Pedros E, Bets-Plasencia C, Pascual-Ahuir A, Proft M.

J Biol Chem. 2015 Apr 17;290(16):10163-75. doi: 10.1074/jbc.M115.637264. Epub 2015 Mar 5.

2015

Leaf expansion in Arabidopsis is controlled by a TCP-NGA regulatory module likely conserved in distantly related species

Ballester P, Navarrete-Gómez M, Carbonero P, Oñate-Sánchez L, Ferrándiz C.

Physiol Plant. 2015 Sep;155(1):21-32. doi: 10.1111/ppl.12327. Epub 2015 Feb 28.

2015

Viroid RNA turnover: characterization of the subgenomic RNAs of potato spindle tuber viroid accumulating in infected tissues provides insights into decay pathways operating in vivo

Minoia S, Navarro B, Delgado S, Di Serio F, Flores R.

Nucleic Acids Res. 2015 Feb 27;43(4):2313-25. doi: 10.1093/nar/gkv034. Epub 2015 Feb 6.

2015

Functional conservation of an ancestral Pellino protein in helminth species

Cluxton CD, Caffrey BE, Kinsella GK, Moynagh PN, Fares MA, Fallon PG.

Sci Rep. 2015 Jun 29;5:11687. doi: 10.1038/srep11687.

2015

Metabolomic profiling of plant tissues

Rambla JL, López-Gresa MP, Bellés JM, Granell A.

Methods Mol Biol. 2015;1284:221-35. doi: 10.1007/978-1-4939-2444-8_11.

2015

Recent positive selection has acted on genes encoding proteins with more interactions within the whole human interactome

Luisi P, Alvarez-Ponce D, Pybus M, Fares MA, Bertranpetit J, Laayouni H.

Genome Biol Evol. 2015 Apr 2;7(4):1141-54. doi: 10.1093/gbe/evv055.

2015

Identification of Salt Stress Biomarkers in Romanian Carpathian Populations of Picea abies (L.) Karst

Schiop ST, Al Hassan M, Sestras AF, Boscaiu M, Sestras RE, Vicente O.

PLoS One. 2015 Aug 19;10(8):e0135419. doi: 10.1371/journal.pone.0135419. eCollection 2015.

2015

Comparative analysis among the small RNA populations of source, sink and conductive tissues in two different plant-virus pathosystems

Herranz MC, Navarro JA, Sommen E, Pallas V.

BMC Genomics. 2015 Feb 22;16(1):117. doi: 10.1186/s12864-015-1327-5.

2015